“On the transition from prebiotic vesicles to protocellular membranes” – IAS Research Seminar by Kepa Ruiz-Mirazo and Sara Murillo“On the transition from prebiotic vesicles to protocellular membranes” – IAS Research Seminar by Kepa Ruiz-Mirazo and Sara Murillo“On the transition from prebiotic vesicles to protocellular membranes” – IAS Research Seminar by Kepa Ruiz-Mirazo and Sara Murillo

Kepa Ruiz-Mirazo and Sara Murillo will be giving a talk entitled ‘On the transition from prebiotic vesicles to protocellular membranes‘.

Date and place: 9th of October 2012, at 11.00, Room B14, Carlos Santamaría Building.

Abstract: It is well known that the generation of a physical border (a membrane) is a crucial step to the generation of a system with some kind of autonomy. Spatial separation of the internal and external medium allows the system to generate a minimally stable micro-environment (controlling concentration, energy-flow and osmosis) in which a metabolic reaction network could lodge inside maintaining the distinctive far from equilibrium dynamics of the autonomous systems.

In this autonomous context, in which the system has to self-constructed and self-maintained, generation of a compartment is achieved by self-assembly molecules which generates a semi-permeable barrier closely connected to the reaction network (being condition and result of it) and playing an active role in the interaction with the environment, regulating and controlling matter and energy exchanges with it.

Nowadays, these kinds of membranes are made of lipids (amphiphilic molecules that possess both polar and apolar parts) but they have a complicated generation process (which, besides, involves complex molecules). However, there is a different sort of molecules with the same amphiphilic properties which are enough simple to be present in the origin of protocellular systems, the fatty acids. Differences between amphiphile composition and mixtures with other simple molecules show differences on the stability, permeability and self-assembling capacities of such membranes. In general, more complexity means a stability profit and a permeability loss but is has been seen that mixtures of simple molecules allow a wide range of both.

Moreover, in order to be efficient and sufficiently robust, the set of endergonic-exergonic couplings underlying work production in the system has to be, in addition, well regulated. Nowadays this is carried out by enzymes, which change activation energies and regulate metabolic reactions in very sophisticated ways. But at the first stages of the origin these systems, the job ought to be done by more rudimentary catalysts, perhaps oligopeptides or smaller multimers, whose formation would be favored in the context of lipidic or fatty acid self-assembled structures, such as primitive vesicles.

In this talk we will focus on two recently published papers showing new out comings of  experiments with amphiphile mixtures and our future experimental projects about insertion of small peptides in the fatty-acids membrane, based on the `lipid-peptide protocell model´ (Ruiz-Mirazo & Mavelli, 2008) previously in sillico developed.

 

 

Autonomy and Individual Organisms in Biology: A Collaborative PerspectiveAutonomía y Organismos Individuales en Biología: Una Perspectiva Colaborativa

The IAS-Research Center for Life,Mind, and Society organises a workshop on “Autonomy and Individual Biological Organisms“, to be held in San Sebastián on October, 27-28, 2012. You may find all the information about the event at https://aiob.ias-research.net/.

The IAS-Research Center for Life, Mind, and Society organises a workshop on “Autonomy and Individual Biological Organisms“, to be held in San Sebastián on October, 27-28, 2012. You may find all the information about the event at https://aiob.ias-research.net/.

“Emergence of Turn-taking Behaviour on Agency Detection Simulation and Behavioural Turing Test Experiment.” IAS-Research Talk by Hiro Iizuka“Emergence of Turn-taking Behaviour on Agency Detection Simulation and Behavioural Turing Test Experiment.” IAS-Research Talk by Hiro Iizuka“Emergence of Turn-taking Behaviour on Agency Detection Simulation and Behavioural Turing Test Experiment.” IAS-Research Talk by Hiro Iizuka

Dr. Hiro Iizuka will be giving a talk on “Emergence of Turn-taking Behaviour on Agency Detection Simulation and Behavioural Turing Test Experiment.”

Date and place: 4th September 2012, at 14.30, Room B1, Carlos Santamaría Building.

Abstract: In this talk, I will talk about a simulation study for agency detection and human experiments for behavioural turing test. These are recent results of series of my work using perceptual crossing paradigm where the interaction of agents or humans is restricted into simple sensor and motor. In the agency detection it is investigated how the embodied agents can establish a live interaction and discriminate this from interactions from recorded motions that are identical to the live interaction but cannot react contingently. In the behavioural turing test, it is investigated how the human can discriminate with the non-human moving objects. Both studies support that the turn-taking behaviour plays an important role to achieve the tasks and we will see how the simple embodied interaction can evolve to communicative interaction.Dr. Hiro Iizuka will be giving a talk on “Emergence of Turn-taking Behaviour on Agency Detection Simulation and Behavioural Turing Test Experiment.”

Date and place: 4th September 2012, at 14.30, Room B1, Carlos Santamaría Building.

Abstract: In this talk, I will talk about a simulation study for agency detection and human experiments for behavioural turing test. These are recent results of series of my work using perceptual crossing paradigm where the interaction of agents or humans is restricted into simple sensor and motor. In the agency detection it is investigated how the embodied agents can establish a live interaction and discriminate this from interactions from recorded motions that are identical to the live interaction but cannot react contingently. In the behavioural turing test, it is investigated how the human can discriminate with the non-human moving objects. Both studies support that the turn-taking behaviour plays an important role to achieve the tasks and we will see how the simple embodied interaction can evolve to communicative interaction.Dr. Hiro Iizuka will be giving a talk on “Emergence of Turn-taking Behaviour on Agency Detection Simulation and Behavioural Turing Test Experiment.”

Date and place: 4th September 2012, at 14.30, Room B1, Carlos Santamaría Building.

Abstract: In this talk, I will talk about a simulation study for agency detection and human experiments for behavioural turing test. These are recent results of series of my work using perceptual crossing paradigm where the interaction of agents or humans is restricted into simple sensor and motor. In the agency detection it is investigated how the embodied agents can establish a live interaction and discriminate this from interactions from recorded motions that are identical to the live interaction but cannot react contingently. In the behavioural turing test, it is investigated how the human can discriminate with the non-human moving objects. Both studies support that the turn-taking behaviour plays an important role to achieve the tasks and we will see how the simple embodied interaction can evolve to communicative interaction.

“Mechanisms in the Sciences: A Field Guide” IAS-Research Talk by Federica Russo

Dr. Federica Russo will give a talk entitled “Mechanisms in the Sciences: A Field Guide“.

Date and Venue: 12th of June, at 15:00,  Room B14 – Carlos Santamaria.

Abstract:The philosophical literature mechanisms is growing rapidly. In this seminar, I will try to offer a panoramic view of the main issues involved. In particular, I will consider (i) why mechanisms gained popularity, especially in connection with causality and explanation; (ii) the distinction between mechanistic reasoning and evidence of mechanisms; (iii) the disputed ‘Russo-Williamson Thesis’ and its consequences for monistic and pluralistic approaches to conceptual analysis; (iv) the role mechanisms play in (some) scientific contexts. 

 

“Cognition and Consciousness” Retecog Summer School 2012

The Retecog Network fosters interdisciplinary collaboration to promote the advancement of Cognitive Science in Spain. This summer school aims to offer an overview of research in Cognitive Science through the choice of an area of research which provides a clear demonstration of the potential benefits of multidisciplinary cross-fertilization. It is addressed to graduate students, or recent doctors, interested in gaining a broader view of their research topic, and benefit from interdisciplinary collaboration. Participants are expected to present their current projects, either as poster or oral presentation, and will be offered feedback and further support.

More information at: http://summerschool.retecog.net 

 

Full week course on Bioethics and Film

Looking at Bioethics through the Lens of Both American and Spanish Films

University of the Basque Country (UPV/EHU), Donostia – San Sebastian, March 11-16, 2012

This is the first time we host this international program in collaboration with Case Western Reserve University. Taught by faculty from CWRU and UPV/EHU this course offers students a cross-cultural perspective on bioethics in the United States and Spain. This course uses the medium of film, complemented by readings in bioethics, film criticism, and medical research, to introduce students to a number of compelling bioethics issues.

Attendance to San Sebastian activities free of charge for IAS-Research members, UPV/EHU researchers and “Filosofía, Ciencia y Valores / Filosofia, Zientzia eta Balioak” master students.

More info: antonio.casado AT ehu DOT es

Continue reading

PhD fellowship to work with usBeca predoctoral para trabajar con nosotros

Call for a 4 year FPI (PhD) fellowship associated with the research project “Autonomy and Levels of Organization” (FFI2011-25665) in the Department of Logic and Philosophy of Science at the University of the Basque Country (UPV/EHU)

Deadline: 23th of February 2012

Se convoca una beca predoctoral FPI de 4 años asociada al proyecto: ”AUTONOMIA Y NIVELES DE ORGANIZACIÓN” (FFI2011-25665), Departamento de Lógica y Filosofía de la Ciencia, Universidad del País Vasco (UPV/EHU)

Plazo: 23 de febrero

Continue reading

New site

After a long time of hard work we can proudly present our new website. With lots of features like:

  • Event integration on Google Calendar
  • IAS-Research member blogs’ feed
  • Automatic integration of publications via Zotero (using the Zotpress plugin)
  • An intranet
  • User profiles
  • Featured content
  • An much more…

Powered by WordPress.org and all content copylefted.