IAS-Research Seminar by Leonardo Bich (UPV/EHU): “Multicellularity: realizing functional integration by organising the intercellular space”

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Multicellularity: realizing functional integration by organising the intercellular space

Leonardo Bich (UPV/EHU)

Tuesday 17 December 2019 at 11:30  (Centro Carlos Santamaria, B14)

Abstract

The question addressed in this talk is how multicellular systems realise functionally integrated physiological entities by organising their intercellular space. 

From a perspective centred on physiology and integration, biological systems are often characterised as organised in such a way that they realise metabolic self-production and self-maintenance. The existence and activity of their components rely on the network they realise and on the continuous management of the exchange of matter and energy with their environment. One of the virtues of the organismic approach focused on organisation is that it can provide an understanding of how biological systems are functionally integrated into coherent wholes.

Organismic frameworks have been primarily developed by focusing on unicellular life. Multicellularity, however, presents additional challenges to our understanding of biological systems, related to how cells are capable to live together in higher-order entities, in such a way that some of their features and behaviours are constrained and controlled by the system they realise. Whereas most accounts of multicellularity focus on cell differentiation and increase in size as the main elements to understand biological systems at this level of organisation, these factors are insufficient to provide an understanding of how cells are physically and functionally integrated in a coherent system.

To address these issues, I present a new theoretical framework of multicellularity. The thesis is that one of the fundamental theoretical principles to understand multicellularity, which is missing or underdeveloped in current accounts, is the functional organisation of the intercellular space. From this perspective, the capability to be organised in space plays a central role in this context, as it enables (and allows to exploit all the implications of) cell differentiation and increase in size, and even specialised functions such as immunity. The extracellular matrix plays a crucial active role in this respect, together with the strategies employed by multicellular systems to exert control upon internal movement and communication. Finally, I show how the organisation of space is involved in some of the failures of multicellular organisation, such as aging and cancer.

IAS-Research Seminar by Enara García and Iñigo Arandia-Romero (UPV/EHU): “La patología en la filosofía de la individuación de Gilbert Simondon”

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La patología en la filosofía de la individuación de Gilbert Simondon

Enara García and Iñigo Arandia-Romero (UPV/EHU)

Tuesday 19 November 2019 at 11:30  (Centro Carlos Santamaria, B14)

Language: Spanish

Abstract

En este trabajo, proponemos mirar en la filosofía de la individuación de Gilbert Simondon para ofrecer un entendimiento de lo patológico desde una ontología procesual y relacional que diluye tanto la discontinuidad entre procesos vitales y psíquicos como la dicotomía entre individuo y sociedad. Simondon propone estudiar, no tanto los individuos ya constituidos, sino el proceso de ontogénesis del individuo que, en el caso del ser humano, está mediado por su participación en lo colectivo. En este proceso, la afectividad juega un papel central, ya que atraviesa tanto la individuación vital, como la psíquica y la colectiva, conectando el conjunto de tensiones y potencialidades existentes previas al proceso de individuación (lo pre-individual) con el individuo constituido. Este cambio de perspectiva permite entender la patología, no en términos normativos, sino como el estudio de la dinámica de la afección, con su historia previa y sus posibilidades de evolución, e influyendo también en nuestra comprensión de los procesos terapéuticos.

IAS-Research Seminar by Manuel Heras-Escribano and Miguel Aguilera (UPV/EHU): “Autopoiesis in the Game of Life”

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Autopoiesis in the Game of Life

Manuel Heras-Escribano and Miguel Aguilera (UPV/EHU)

Tuesday 3 December 2019 at 11:30  (Centro Carlos Santamaria, B14)

Abstract

In this talk, we will review a series of papers by Randall Beer. In these work he uses the Game of Life to exemplify different aspects and concepts autopoiesis and enactivism, using the model as a laboratory in which theoretical concepts can be developed to the point where they can be used to actually calculate things (autopoietic networks and operational closure, destructive/non-destructive perturbations, structural coupling…). Reviewing the work in this minimal world we will discuss 1) how different aspects of autopoiesis and autonomy can or cannot be displayed by minimal agents in a cellular automata, 2) how this type of study may be useful for concretizing ongoing debates on the foundations of enaction.

IAS-Research Seminar by Iñigo Arandia-Romero (UPV/EHU): “Enactive and Simondonian reflections on placebo phenomena”

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Enactive and Simondonian reflections on placebo phenomena

Iñigo Arandia-Romero (UPV/EHU)

Tuesday 26 November 2019 at 11:30  (Centro Carlos Santamaria, B14)

Abstract

Placebo effects have played a key role in the history of medicine, and they are still nowadays extremely useful as the gold standard to test the efficacy of many treatments through Randomized Control Trials (RCT). Despite its importance, they did not receive much research attention until the last two decades or so, and we are still far from a complete understanding of the phenomena related to the umbrella-term placebo. We will show that part of the problems and limitations to understand the placebo effects is related to theoretical assumptions that are often implicit in the current biomedical paradigm: the mind-body dualism, the predominance of individualism, the reductionist tendency to study isolated factors, and neglecting the dynamic nature of human beings (i.e, their history and evolution process). By taking advantage of the distinction between pre-reflective and reflective consciousness employed in the phenomenological tradition, the theoretical framework of the enactive perspective, and the philosophy of individuation developed by Gilbert Simondon, we will propose a novel way to analyze placebo interventions that overcomes some of the limitations of current approaches, and is able to explain part of the huge variability of placebo responses, across subjects and across conditions. Instead of offering a full account of placebo phenomena, we will provide insights to better analyze different experimental paradigms employed in placebo research considering that each subject is an embodied agent situated in a social environment with concrete problems that can be interpreted as a sense-making challenge or a search for meaning. Then, the placebo intervention can be understood as just the last step that triggers a large response but that would be impossible without the history of the subject, all her previous attempts to cope with her condition in her social context, the patient-practitioner interaction and other features that are often neglected or labelled as non-specific in the placebo literature.

IAS-Research Seminar by Arantza Etxeberria (UPV/EHU): “Revisiting the “organism/environment interaction” category”

Revisiting the “organism/environment interaction” category

Arantza Etxeberria (UPV/EHU)

Tuesday 12 November 2019 at 11:30  (Centro Carlos Santamaria, B14)

Abstract

The “organism/environment interaction” has been an important category in biomedical sciences since the end of the 19th century. It brings forward the view of the organism as an autonomous biological entity, with an internally controlled and regulated physiology, interacting with an environment providing opportunities and viability constraints for its living activities. It is often remarked that organisms can transform or construct these environments according to their needs (dialectical views of development and evolution; niche construction; technologies), or that they need to accommodate their lives and norms to restricted environments in case of disease. This presentation will introduce work in progress intending to examine and discuss the current scientific role of this category in biomedicine. On the grounds of some conceptual and empirical challenges, proposals tending to privilege deeper interconnectivities will be considered. This research is integrated within the Inter-identity Project (Mineco FFI2014-52173-P Research Project on Identities in interaction).

IAS-Research Seminar by Guglielmo Militello: Motility Control of Symbionts and Organelles by the Eukaryotic Cell

Motility Control of Symbionts and Organelles by the Eukaryotic Cell

Guglielmo Militello

Tuesday 29 at 11:30 (Centro Carlos Santamaria B14)

 

Motility occupies a decisive role in an organism’s ability to autonomously interact with its environment. However, collective biological organizations exhibit individual parts, which have temporally or definitively lost their motor capacities, but still able to autonomously interact with their host. Indeed, although the flagella of bacterial symbionts of eukaryotic cells are usually inhibited or lost, they autonomously modify the environment provided by their host. Furthermore, the eukaryotic organelles of endosymbiotic origin (i.e., mitochondria and plastids) are no longer able to move autonomously; nonetheless, they make a cytoskeletal-driven motion that allows them to communicate with other eukaryotic cells and to perform a considerable number of physiological functions. The purpose of this article is twofold: first, to investigate how changes in the motile capacities of the parts of a nested biological organization affect their interactive autonomy; second, to examine how the modification of the interactive autonomy of the individual parts influences the constitutive autonomy of the collective association as a whole. The article argues that the emergence and maintenance of collective biological identities involves a strict control of the motile abilities of their constituting members. This entails a restriction, but not necessarily a complete loss, of the agential capacities of the individual parts.

 

IAS-Research Seminar by Iñigo Arandia. “Epistemic entanglement in the macroscopic world”

Date and time: April 9th, Tuesday, 11:30 a.m.

Location: Carlos Santamaría Building, Room B14.

Speaker: Iñigo Arandia (UPV/EHU)

Title: “Epistemic entanglement in the macroscopic world”

Abstract

Scientific non-reductionism emphasizes that the whole is more than the sum of the parts. Beyond metaphor, such holistic idea can be made concrete (namely, mathematically formulated and empirically testable) via the notion of entanglement, which is a foundational concept and an established phenomenon in quantum mechanics related to Heisenberg’s uncertainty principle (a fundamental limit to the precision of simultaneously measuring two complementary variables, like the position and momentum of an electron, which is not a consequence of experimental limitations). Here we present a classical analog of entanglement, where uncertainty relations arise from experimental commitments, like the selection of variables and/or subsystems, or ignorance about the context. Inspired by a theoretical work offering a definition of entanglement in a model of macroscopic brownian particles (Allahverdyan et al., 2005), we propose a general sufficient condition for epistemic entanglement that is valid for any underlying dynamics and any pair of macroscopic stochastic observables. Our bound reflects a trade-off between inter-vs-intra particle correlations, and only requires estimating dispersions. This makes it empirically accessible and also somewhat intuitive. We explored the origin of epistemic entanglement by taking advantage of analytical results available in brownian models and simulations of stochastic systems. Then, we applied our sufficient condition to behavioral data of fly courtship, and found entanglement between position and coarse-grained velocity. This result implies the existence of macroscopic correlations that cannot be effectively explained in causal terms, thus limiting the common cause principle. Our work also challenges the idea of pure objectivity, as our choice of measurement variables induced epistemic correlations that cannot be adjudicated to the observed system but that, through coarse-graining, belong to the observer.

IAS-Research Seminar by Miguel Escribano. “G.W. Leibniz y el problema del origen de los cuerpos orgánicos. Educción y preformacionismo”

Date and time: January 22, Tuesday, 14:30 a.m.

Location: Carlos Santamaría Building, Room B14.

Speaker: Miguel Escribano (UPV/EHU)

Title: “G.W. Leibniz y el problema del origen de los cuerpos orgánicos. Educción y preformacionismo”

Abstract

“El problema del origen de la vida, como hoy en día se plantea, no es directamente abordado durante la modernidad filosófica. Existen, sin embargo, algunos debates que podríamos considerar al respecto por su cercanía a este problema. El caso de G.W. Leibniz es especialmente relevante. Por un lado, su Dinámica tiene la pretensión de convertirse en una ‘ontología general’ que de cuenta de todas las parcelas de lo real en términos de fuerza y forma. En este sentido, su visión de la naturaleza implica una cierta continuidad y coordinación entre las dinámicas características a los tres reinos naturales. Este programa ontológico no está exento de contradicciones. Leibniz nos aporta algunas herramientas para abordar estas contradicciones. En esta presentación haré mención a dos de ellas: por un lado, la teoría de la educción (importancia del pensamiento químico) y, por otro lado, la idea de preformación (importancia del pensamiento biológico). Considerando ambas teorías se plantea el siguiente problema: ¿existe una incompatibilidad entre la perspectiva diacrónico-embriogenética (biológica) que defiende que toda forma orgánica procede de otra forma orgánica y la perspectiva sincrónico-emergente (química) que defiende por su parte que la dinámica organizacional que caracteriza a un organismo educe a un cierto nivel de complejidad natural?”

Reading group on Evolution and Cognition

 

1. Objectives: 

  • Introduce basic notions of evolutionary biology and physiology of the nervous system.
  • Understand current discussion on the evolution of human cognition.
  • Discuss the role of the interaction between organism and environment in the evolution of the nervous system.

2. Format

Eleven reading seminars lasting 1.5h around different authors and topics that aim to explain the evolution of the nervous system and cognition in human beings. In each session, one participant will shortly (20min) present the topic in order to facilitate the discussion. After every session, this participant will prepare a summary of the discussion. The final transcript will be evaluated for feedback by the coordinator.

3. Schedule, topics, and readings

Seminars will take place from January to June 2019, on alternate Thursdays from 15:00 to 16:30h, open to online and in-person participation at the Carlos Santamaría Center Seminar 14.

Session Date Topic Bibliography
1. January, 10 Introduction Moreno, A., & Lasa, A. (2003). From basic adaptivity to early mind. Evolution and Cognition, 9(1).

Rosslenbroich, B. (2014). On the origin of autonomy: a new look at the major transitions in evolution (Vol. 5). Springer Science & Business Media. Chapters 8, 10.1 y 10.2

2. January, 24 Evolution of the nervous system I. Dynamic Systems Barandiaran, X., & Moreno, A. (2006). On what makes certain dynamical systems cognitive: A minimally cognitive organization program. Adaptive Behavior, 14(2), 171-185.
3. February, 7 Evolution of the nervous system II. Plant and animal cognition Calvo Garzón, P., & Keijzer, F. (2011). Plants: Adaptive behavior, root-brains, and minimal cognition. Adaptive Behavior, 19(3), 155-171.

Keijzer, F. (2015). Moving and sensing without input and output: Early nervous systems and the origins of the animal sensorimotor organization. Biology & Philosophy, 30, 311–331

4. February, 21 Evolution and Agency Barandiarán, X. (2008). Mental Life. A naturalized approach to the autonomy of cognitive agents. [Thesis Capítulos 5 y 6]
5. 7 March The 4 dimensions of evolution Jablonka, E., & Lamb, M. J. (2007). Précis of evolution in four dimensions. Behavioral and Brain Sciences, 30(4), 353-365.
6. March, 21 Cognitive functions: working memory and the frontal lobe Damasio, El error de Descartes. capítulos 2,3 y 4.

Frederick L. Coolidge, Thomas Wynn. 2009.The Rise of Homo Sapiens, The Evolution of Modern Thinking [capítulo 3]

7. April, 4 Evolution and reproduction Gruss, L. T., & Schmitt, D. (2015). The evolution of the human pelvis: changing adaptations to bipedalism, obstetrics and thermoregulation. Phil. Trans. R. Soc. B, 370(1663), 20140063.
8. April, 18 Cultural Evolution I Portin, P. (2015). A comparison of biological and cultural evolution. Journal of genetics, 94(1), 155-168.

Lewens, T. (2015). Cultural evolution: conceptual challenges. OUP Oxford (capítulo 1)

9. May, 2 Cultural Evolution II Dunbar, R. I. (2009). The social brain hypothesis and its implications for social evolution. Annals of human biology, 36(5), 562-572.

Laland, K., Matthews, B., & Feldman, M. W. (2016). An introduction to niche construction theory. Evolutionary ecology, 30(2), 191-202.

10. May, 16 Evolution and 4E Cognition Barrett, L. The evolution of cognition: a 4E perspective. The Oxford Handbook of 4e Cognition. New York: Oxford UP.

Malafouris, L. Bringing things to mind. In The Oxford Handbook of 4E Cognition.

11. May, 30
Congress July, 10-14 4E Cognition Theories

4. Coordination and more information

In order to join the reading group or request further information, please contact the coordinators:

Enara Garcia (enara.garcia.otero@gmail.com)

Guglielmo Militello (guglielmo.militello@ehu.eus)

Alejandra Martínez Quintero (alejandra.mtz.quintero@gmail.com)

IAS-Research Seminar by Miguel Aguilera: “Integrated information and autonomy in the thermodynamic limit”

Date and time: June 26, Tuesday, 11:30 a.m.

Location: Carlos Santamaría Building, Room B14.

Speaker: Miguel Aguilera (sci@maguilera.net)

Title: Integrated information and autonomy in the thermodynamic limit

Abstract: The concept of autonomy is fundamental for understanding biological organizationand the evolutionary transitions of living systems. Understanding how a system constitutes itself as an individual, cohesive, self-organized entity is a fundamental challenge for the understanding of life. However, it is generally a difficult task to determine whether the system or its environment has generated the correlations that allow an observer to trace the boundary of a living system as a coherent unit. Inspired by the framework of integrated information theory, we propose a measure of the level of integration of a system as the response of a system to partitions that introduce perturbations in the interaction between subsystems, without assuming the existence of a stationary distribution. With the goal of characterizing transitions in integrated information in the thermodynamic limit, we apply this measure to kinetic Ising models of infinite size using mean field techniques. Our findings suggest that, in order to preserve the integration of causal influences of a system as it grows in size, a living entity must be poised near critical points maximizing its sensitivity to perturbations in the interaction between subsystems. Moreover, we observe how such a measure is able to delimit an agent and its environment, being able to characterize simple instances of agent-environment asymmetries in which the agent has the ability to modulate its coupling with the environment.